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Q&A Import onnxruntime then load_dataset "causes ImportError: /lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.29' not found": why + how to fix?

Running import onnxruntime as ort from datasets import load_dataset yields the error: (env-312) dernoncourt@pc:~/test$ python SE--test_importpb.py Traceback (most recent call last): File...

1 answer · posted 4d ago by Franck Dernoncourt‭ · last activity 3d ago by Franck Dernoncourt‭

Question python huggingface-datasets onnxruntime glibc

#2: Post edited by

Franck Dernoncourt‭ · 2025-04-30T02:37:41Z (4 days ago)

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Running
```python
import onnxruntime as ort
from datasets import load_dataset
```
yields the error:
```
(env-312) dernoncourt@pc:~/test$ python SE--test_importpb.py
Traceback (most recent call last):
File "/home/dernoncourt/test/SE--test_importpb.py", line 2, in <module>
from datasets import load_dataset
File "/opt/conda/envs/env-312/lib/python3.12/site-packages/datasets/__init__.py", line 17, in <module>
from .arrow_dataset import Dataset
File "/opt/conda/envs/env-312/lib/python3.12/site-packages/datasets/arrow_dataset.py", line 57, in <module>
import pyarrow as pa
File "/opt/conda/envs/env-312/lib/python3.12/site-packages/pyarrow/__init__.py", line 65, in <module>
import pyarrow.lib as _lib
ImportError: /lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.29' not found (required by /opt/conda/envs/env-312/lib/python3.12/site-packages/pyarrow/lib.cpython-312-x86_64-linux-gnu.so)
(env-312) dernoncourt@pc:~/test$
```
Why and how to fix? I use:
- Python 3.12.9
- Ubuntu 20.04.5 LTS
- `datasets==3.5.0`
- `onnxruntime==1.21.0`
~~Running `from datasets import load_dataset` or `import onnxruntime as ort` alone works fine.~~

Running
```python
import onnxruntime as ort
from datasets import load_dataset
```
yields the error:
```
(env-312) dernoncourt@pc:~/test$ python SE--test_importpb.py
Traceback (most recent call last):
File "/home/dernoncourt/test/SE--test_importpb.py", line 2, in <module>
from datasets import load_dataset
File "/opt/conda/envs/env-312/lib/python3.12/site-packages/datasets/__init__.py", line 17, in <module>
from .arrow_dataset import Dataset
File "/opt/conda/envs/env-312/lib/python3.12/site-packages/datasets/arrow_dataset.py", line 57, in <module>
import pyarrow as pa
File "/opt/conda/envs/env-312/lib/python3.12/site-packages/pyarrow/__init__.py", line 65, in <module>
import pyarrow.lib as _lib
ImportError: /lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.29' not found (required by /opt/conda/envs/env-312/lib/python3.12/site-packages/pyarrow/lib.cpython-312-x86_64-linux-gnu.so)
(env-312) dernoncourt@pc:~/test$
```
Why and how to fix? I use:
- Python 3.12.9
- Ubuntu 20.04.5 LTS
- `datasets==3.5.0`
- `onnxruntime==1.21.0`
Running `from datasets import load_dataset` or `import onnxruntime as ort` alone works fine.
-----
Crosspost: https://stackoverflow.com/q/79599437/395857

#1: Initial revision by

Franck Dernoncourt‭ · 2025-04-30T02:37:08Z (4 days ago)

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Import onnxruntime then load_dataset "causes ImportError: /lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.29' not found": why + how to fix?

Running

```python
import onnxruntime as ort
from datasets import load_dataset
```

yields the error:

```
(env-312) dernoncourt@pc:~/test$ python SE--test_importpb.py 
Traceback (most recent call last):
  File "/home/dernoncourt/test/SE--test_importpb.py", line 2, in <module>
    from datasets import load_dataset
  File "/opt/conda/envs/env-312/lib/python3.12/site-packages/datasets/__init__.py", line 17, in <module>
    from .arrow_dataset import Dataset
  File "/opt/conda/envs/env-312/lib/python3.12/site-packages/datasets/arrow_dataset.py", line 57, in <module>
    import pyarrow as pa
  File "/opt/conda/envs/env-312/lib/python3.12/site-packages/pyarrow/__init__.py", line 65, in <module>
    import pyarrow.lib as _lib
ImportError: /lib/x86_64-linux-gnu/libstdc++.so.6: version `GLIBCXX_3.4.29' not found (required by /opt/conda/envs/env-312/lib/python3.12/site-packages/pyarrow/lib.cpython-312-x86_64-linux-gnu.so)
(env-312) dernoncourt@pc:~/test$ 
```

Why and how to fix? I use:

- Python 3.12.9
- Ubuntu 20.04.5 LTS
- `datasets==3.5.0`
- `onnxruntime==1.21.0`

Running `from datasets import load_dataset` or `import onnxruntime as ort` alone works fine.

python huggingface-datasets onnxruntime glibc

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